Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX6-1P78426 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX6-1P78426 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NKX6-1P78426 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 AC126755.1-201ENST00000525846 6405 ntBASIC14.72□□□□□ -0.05
NKX6-1P78426 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NKX6-1P78426 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX6-1P78426 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NKX6-1P78426 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.71□□□□□ -0.05
NKX6-1P78426 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX6-1P78426 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX6-1P78426 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.71□□□□□ -0.05
NKX6-1P78426 MIR4745-201ENST00000577608 62 ntBASIC14.71□□□□□ -0.05
NKX6-1P78426 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.71□□□□□ -0.05
NKX6-1P78426 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 AL513210.1-201ENST00000629608 234 ntBASIC14.71□□□□□ -0.05
NKX6-1P78426 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
NKX6-1P78426 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX6-1P78426 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX6-1P78426 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NKX6-1P78426 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.71□□□□□ -0.06
NKX6-1P78426 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NKX6-1P78426 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NKX6-1P78426 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 PP12613-201ENST00000424958 2230 ntBASIC14.7□□□□□ -0.06
NKX6-1P78426 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX6-1P78426 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NKX6-1P78426 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.7□□□□□ -0.06
NKX6-1P78426 AC004461.1-201ENST00000412461 403 ntBASIC14.7□□□□□ -0.06
NKX6-1P78426 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX6-1P78426 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 FAM86GP-201ENST00000448322 971 ntBASIC14.7□□□□□ -0.06
NKX6-1P78426 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 SLC25A6P2-201ENST00000497974 877 ntBASIC14.7□□□□□ -0.06
NKX6-1P78426 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX6-1P78426 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.7□□□□□ -0.06
NKX6-1P78426 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX6-1P78426 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX6-1P78426 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX6-1P78426 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms