Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
ACTA1P68133 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.89□□□□□ -0.03
ACTA1P68133 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ACTA1P68133 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ACTA1P68133 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.89□□□□□ -0.03
ACTA1P68133 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 AL671710.1-201ENST00000610245 2349 ntBASIC14.88□□□□□ -0.03
ACTA1P68133 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ACTA1P68133 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ACTA1P68133 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.88□□□□□ -0.03
ACTA1P68133 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 ABCD1P5-201ENST00000445663 754 ntBASIC14.88□□□□□ -0.03
ACTA1P68133 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.88□□□□□ -0.03
ACTA1P68133 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.88□□□□□ -0.03
ACTA1P68133 KRT8P39-201ENST00000396270 1433 ntBASIC14.88□□□□□ -0.03
ACTA1P68133 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ACTA1P68133 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 AL031731.1-201ENST00000642131 2094 ntBASIC14.88□□□□□ -0.03
ACTA1P68133 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ACTA1P68133 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ACTA1P68133 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
ACTA1P68133 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 NCF1C-201ENST00000438382 1427 ntBASIC14.87□□□□□ -0.03
ACTA1P68133 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ACTA1P68133 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ACTA1P68133 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ACTA1P68133 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 AL031133.1-201ENST00000406807 723 ntBASIC14.87□□□□□ -0.03
ACTA1P68133 TSSC2-201ENST00000450217 709 ntBASIC14.87□□□□□ -0.03
ACTA1P68133 TOB2P1-201ENST00000469761 992 ntBASIC14.87□□□□□ -0.03
ACTA1P68133 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 KRT18P35-201ENST00000510488 1269 ntBASIC14.87□□□□□ -0.03
ACTA1P68133 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ACTA1P68133 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ACTA1P68133 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.87□□□□□ -0.03
ACTA1P68133 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ACTA1P68133 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.86□□□□□ -0.03
ACTA1P68133 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 AL512652.2-201ENST00000625156 1716 ntBASIC14.86□□□□□ -0.03
ACTA1P68133 LINC01144-201ENST00000626198 1710 ntBASIC14.86□□□□□ -0.03
ACTA1P68133 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 AC104640.1-201ENST00000562617 2109 ntBASIC14.86□□□□□ -0.03
ACTA1P68133 SNX33P1-201ENST00000592116 1762 ntBASIC14.86□□□□□ -0.03
ACTA1P68133 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.86□□□□□ -0.03
ACTA1P68133 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.86□□□□□ -0.03
ACTA1P68133 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ACTA1P68133 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms