Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KRT19P2-202ENST00000557173 1012 ntBASIC16.22■□□□□ 0.19
YBX1P67809 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.22■□□□□ 0.19
YBX1P67809 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.22■□□□□ 0.19
YBX1P67809 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.22■□□□□ 0.19
YBX1P67809 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.22■□□□□ 0.19
YBX1P67809 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YBX1P67809 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
YBX1P67809 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 AC006277.1-201ENST00000624348 1610 ntBASIC16.21■□□□□ 0.19
YBX1P67809 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 HMGA1P7-201ENST00000406908 502 ntBASIC16.21■□□□□ 0.19
YBX1P67809 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
YBX1P67809 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.21■□□□□ 0.19
YBX1P67809 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
YBX1P67809 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.21■□□□□ 0.19
YBX1P67809 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.21■□□□□ 0.19
YBX1P67809 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 AL353732.1-201ENST00000569618 1459 ntBASIC16.21■□□□□ 0.19
YBX1P67809 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YBX1P67809 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
YBX1P67809 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
YBX1P67809 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.21■□□□□ 0.18
YBX1P67809 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.21■□□□□ 0.18
YBX1P67809 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 PMS2P7-201ENST00000506558 1336 ntBASIC16.2■□□□□ 0.18
YBX1P67809 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
YBX1P67809 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.2■□□□□ 0.18
YBX1P67809 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
YBX1P67809 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
YBX1P67809 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.2■□□□□ 0.18
YBX1P67809 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.2■□□□□ 0.18
YBX1P67809 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.2■□□□□ 0.18
YBX1P67809 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YBX1P67809 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.2■□□□□ 0.18
YBX1P67809 GPALPP1-207ENST00000611650 899 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms