Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CYMP-203ENST00000474680 1263 ntBASIC17.5■□□□□ 0.39
USP46P62068 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.5■□□□□ 0.39
USP46P62068 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 AL138918.1-201ENST00000568306 659 ntBASIC17.5■□□□□ 0.39
USP46P62068 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.5■□□□□ 0.39
USP46P62068 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.5■□□□□ 0.39
USP46P62068 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.5■□□□□ 0.39
USP46P62068 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.5■□□□□ 0.39
USP46P62068 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USP46P62068 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP46P62068 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP46P62068 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 GPS2P2-201ENST00000430745 888 ntBASIC17.49■□□□□ 0.39
USP46P62068 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 AC004449.1-201ENST00000564240 433 ntBASIC17.49■□□□□ 0.39
USP46P62068 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.49■□□□□ 0.39
USP46P62068 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 AL391256.1-201ENST00000443260 1855 ntBASIC17.49■□□□□ 0.39
USP46P62068 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.49■□□□□ 0.39
USP46P62068 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
USP46P62068 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
USP46P62068 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP46P62068 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.48■□□□□ 0.39
USP46P62068 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP46P62068 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 KRT18P32-201ENST00000424695 1287 ntBASIC17.48■□□□□ 0.39
USP46P62068 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.48■□□□□ 0.39
USP46P62068 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.48■□□□□ 0.39
USP46P62068 AC021097.1-201ENST00000607902 574 ntBASIC17.48■□□□□ 0.39
USP46P62068 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.48■□□□□ 0.39
USP46P62068 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
USP46P62068 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
USP46P62068 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.48■□□□□ 0.39
USP46P62068 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
USP46P62068 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.48■□□□□ 0.39
USP46P62068 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP46P62068 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
USP46P62068 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 AD000864.1-201ENST00000624076 2295 ntBASIC17.47■□□□□ 0.39
USP46P62068 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 UXT-AS1-201ENST00000590504 1525 ntBASIC17.47■□□□□ 0.39
USP46P62068 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.47■□□□□ 0.39
USP46P62068 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
USP46P62068 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 AC005915.1-201ENST00000624912 2018 ntBASIC17.47■□□□□ 0.39
USP46P62068 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP46P62068 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP46P62068 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms