Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 AC016027.1-202ENST00000607927 1699 ntBASIC15.21■□□□□ 0.03
CXCR4P61073 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.21■□□□□ 0.02
CXCR4P61073 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.21■□□□□ 0.02
CXCR4P61073 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CXCR4P61073 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 AC132938.5-201ENST00000624980 1813 ntBASIC15.2■□□□□ 0.02
CXCR4P61073 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CXCR4P61073 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCR4P61073 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 ACTG1P4-201ENST00000425123 1122 ntBASIC15.2■□□□□ 0.02
CXCR4P61073 AC022616.7-201ENST00000525383 220 ntBASIC15.2■□□□□ 0.02
CXCR4P61073 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.2■□□□□ 0.02
CXCR4P61073 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.2■□□□□ 0.02
CXCR4P61073 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
CXCR4P61073 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 AC011498.5-201ENST00000592027 486 ntBASIC15.2■□□□□ 0.02
CXCR4P61073 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCR4P61073 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CXCR4P61073 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.2■□□□□ 0.02
CXCR4P61073 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCR4P61073 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCR4P61073 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CXCR4P61073 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCR4P61073 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.19■□□□□ 0.02
CXCR4P61073 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 KLF4P1-201ENST00000412782 1185 ntBASIC15.19■□□□□ 0.02
CXCR4P61073 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CXCR4P61073 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.19■□□□□ 0.02
CXCR4P61073 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CXCR4P61073 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 AC009533.2-201ENST00000543664 586 ntBASIC15.19■□□□□ 0.02
CXCR4P61073 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 AC069224.1-201ENST00000566372 1715 ntBASIC15.19■□□□□ 0.02
CXCR4P61073 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCR4P61073 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCR4P61073 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms