Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4CP60510 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4CP60510 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.53■□□□□ 0.72
PPP4CP60510 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PPP4CP60510 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPP4CP60510 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4CP60510 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 AL080243.2-201ENST00000418783 582 ntBASIC19.52■□□□□ 0.72
PPP4CP60510 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4CP60510 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4CP60510 AL844908.2-201ENST00000609461 460 ntBASIC19.52■□□□□ 0.72
PPP4CP60510 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4CP60510 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PPP4CP60510 AC022144.1-201ENST00000602255 1580 ntBASIC19.52■□□□□ 0.71
PPP4CP60510 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.52■□□□□ 0.71
PPP4CP60510 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PPP4CP60510 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PPP4CP60510 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PPP4CP60510 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PPP4CP60510 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.52■□□□□ 0.71
PPP4CP60510 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PPP4CP60510 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4CP60510 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PPP4CP60510 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PPP4CP60510 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PPP4CP60510 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.51■□□□□ 0.71
PPP4CP60510 SPDYE17-201ENST00000412399 783 ntBASIC19.51■□□□□ 0.71
PPP4CP60510 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.51■□□□□ 0.71
PPP4CP60510 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.51■□□□□ 0.71
PPP4CP60510 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4CP60510 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.51■□□□□ 0.71
PPP4CP60510 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 AC009407.1-201ENST00000568958 598 ntBASIC19.51■□□□□ 0.71
PPP4CP60510 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.51■□□□□ 0.71
PPP4CP60510 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.51■□□□□ 0.71
PPP4CP60510 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4CP60510 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4CP60510 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4CP60510 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4CP60510 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PPP4CP60510 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4CP60510 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4CP60510 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PPP4CP60510 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
PPP4CP60510 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.5■□□□□ 0.71
PPP4CP60510 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4CP60510 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.5■□□□□ 0.71
PPP4CP60510 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PPP4CP60510 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4CP60510 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PPP4CP60510 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PPP4CP60510 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PPP4CP60510 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 AC106820.2-201ENST00000563775 3264 ntBASIC19.5■□□□□ 0.71
PPP4CP60510 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4CP60510 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms