Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 AC026396.1-201ENST00000419388 421 ntBASIC17.33■□□□□ 0.36
CDH6P55285 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 IGHV3-22-201ENST00000520721 359 ntBASIC17.33■□□□□ 0.36
CDH6P55285 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH6P55285 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH6P55285 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDH6P55285 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDH6P55285 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH6P55285 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CDH6P55285 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH6P55285 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH6P55285 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH6P55285 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.32■□□□□ 0.36
CDH6P55285 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 CRYGEP-201ENST00000412192 528 ntBASIC17.32■□□□□ 0.36
CDH6P55285 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 VN2R19P-201ENST00000442399 1052 ntBASIC17.32■□□□□ 0.36
CDH6P55285 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH6P55285 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH6P55285 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH6P55285 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH6P55285 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH6P55285 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH6P55285 CYP2T1P-202ENST00000641596 2535 ntBASIC17.31■□□□□ 0.36
CDH6P55285 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH6P55285 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH6P55285 MIR4515-201ENST00000584082 81 ntBASIC17.31■□□□□ 0.36
CDH6P55285 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH6P55285 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH6P55285 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH6P55285 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH6P55285 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms