Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB4P54760 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 MRPS18AP1-201ENST00000414458 589 ntBASIC18.72■□□□□ 0.59
EPHB4P54760 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHB4P54760 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB4P54760 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHB4P54760 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHB4P54760 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.72■□□□□ 0.59
EPHB4P54760 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB4P54760 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB4P54760 AKAP8P1-201ENST00000434743 1349 ntBASIC18.72■□□□□ 0.59
EPHB4P54760 AC129492.6-201ENST00000611383 1305 ntBASIC18.72■□□□□ 0.59
EPHB4P54760 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
EPHB4P54760 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 PCDHB19P-201ENST00000570871 2371 ntBASIC18.71■□□□□ 0.59
EPHB4P54760 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHB4P54760 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EPHB4P54760 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 RN7SL692P-201ENST00000464677 288 ntBASIC18.71■□□□□ 0.59
EPHB4P54760 AC002558.1-201ENST00000488906 803 ntBASIC18.71■□□□□ 0.59
EPHB4P54760 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHB4P54760 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.71■□□□□ 0.59
EPHB4P54760 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.71■□□□□ 0.59
EPHB4P54760 AL358472.5-202ENST00000641448 1267 ntBASIC18.71■□□□□ 0.59
EPHB4P54760 AL645728.2-201ENST00000641974 660 ntBASIC18.71■□□□□ 0.59
EPHB4P54760 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHB4P54760 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHB4P54760 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
EPHB4P54760 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
EPHB4P54760 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EPHB4P54760 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
EPHB4P54760 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.7■□□□□ 0.58
EPHB4P54760 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
EPHB4P54760 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.7■□□□□ 0.58
EPHB4P54760 AC004890.2-204ENST00000481968 304 ntBASIC18.7■□□□□ 0.58
EPHB4P54760 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
EPHB4P54760 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
EPHB4P54760 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.7■□□□□ 0.58
EPHB4P54760 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHB4P54760 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHB4P54760 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHB4P54760 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
EPHB4P54760 UXT-AS1-201ENST00000590504 1525 ntBASIC18.69■□□□□ 0.58
EPHB4P54760 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHB4P54760 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.69■□□□□ 0.58
EPHB4P54760 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
EPHB4P54760 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHB4P54760 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EPHB4P54760 AC069120.2-201ENST00000524091 540 ntBASIC18.69■□□□□ 0.58
EPHB4P54760 AC107918.2-201ENST00000530817 355 ntBASIC18.69■□□□□ 0.58
EPHB4P54760 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.69■□□□□ 0.58
EPHB4P54760 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms