Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
LBX1P52954 LINC01451-201ENST00000623792 534 ntBASIC18.47■□□□□ 0.55
LBX1P52954 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LBX1P52954 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.47■□□□□ 0.55
LBX1P52954 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
LBX1P52954 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LBX1P52954 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
LBX1P52954 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.46■□□□□ 0.55
LBX1P52954 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LBX1P52954 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.55
LBX1P52954 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 AC015818.8-201ENST00000587907 1519 ntBASIC18.46■□□□□ 0.55
LBX1P52954 AC006001.1-201ENST00000325130 474 ntBASIC18.46■□□□□ 0.55
LBX1P52954 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 C1QBPP1-201ENST00000400117 770 ntBASIC18.46■□□□□ 0.55
LBX1P52954 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.46■□□□□ 0.55
LBX1P52954 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.46■□□□□ 0.55
LBX1P52954 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.46■□□□□ 0.55
LBX1P52954 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 AP001063.1-201ENST00000568332 529 ntBASIC18.46■□□□□ 0.55
LBX1P52954 AP000346.4-201ENST00000614827 381 ntBASIC18.46■□□□□ 0.55
LBX1P52954 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LBX1P52954 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LBX1P52954 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LBX1P52954 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.45■□□□□ 0.54
LBX1P52954 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.45■□□□□ 0.54
LBX1P52954 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.45■□□□□ 0.54
LBX1P52954 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 HIST3H2BA-201ENST00000436555 524 ntBASIC18.45■□□□□ 0.54
LBX1P52954 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.45■□□□□ 0.54
LBX1P52954 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.45■□□□□ 0.54
LBX1P52954 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LBX1P52954 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LBX1P52954 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.45■□□□□ 0.54
LBX1P52954 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LBX1P52954 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LBX1P52954 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 AL021920.2-201ENST00000624828 1351 ntBASIC18.44■□□□□ 0.54
LBX1P52954 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.44■□□□□ 0.54
LBX1P52954 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LBX1P52954 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.44■□□□□ 0.54
LBX1P52954 FO393414.2-201ENST00000405153 598 ntBASIC18.44■□□□□ 0.54
LBX1P52954 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.44■□□□□ 0.54
LBX1P52954 AC016700.1-201ENST00000429424 312 ntBASIC18.44■□□□□ 0.54
LBX1P52954 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LBX1P52954 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.44■□□□□ 0.54
LBX1P52954 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.44■□□□□ 0.54
LBX1P52954 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LBX1P52954 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.44■□□□□ 0.54
LBX1P52954 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LBX1P52954 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.44■□□□□ 0.54
LBX1P52954 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LBX1P52954 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.44■□□□□ 0.54
LBX1P52954 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.43■□□□□ 0.54
LBX1P52954 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 AL627389.1-201ENST00000413508 1182 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms