Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 AC092053.1-201ENST00000605787 1936 ntBASIC16.18■□□□□ 0.18
CLCN2P51788 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN2P51788 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN2P51788 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN2P51788 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCN2P51788 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCN2P51788 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLCN2P51788 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 AL049840.3-201ENST00000602669 611 ntBASIC16.18■□□□□ 0.18
CLCN2P51788 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 AC120114.3-201ENST00000611923 658 ntBASIC16.18■□□□□ 0.18
CLCN2P51788 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN2P51788 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 NCF1C-201ENST00000438382 1427 ntBASIC16.18■□□□□ 0.18
CLCN2P51788 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLCN2P51788 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLCN2P51788 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN2P51788 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN2P51788 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.17■□□□□ 0.18
CLCN2P51788 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN2P51788 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN2P51788 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN2P51788 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 AC105339.3-201ENST00000560043 636 ntBASIC16.17■□□□□ 0.18
CLCN2P51788 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.17■□□□□ 0.18
CLCN2P51788 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN2P51788 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CLCN2P51788 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms