Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC069262.1-201ENST00000539058 672 ntBASIC18.33■□□□□ 0.52
GPC3P51654 AC026150.2-201ENST00000564693 1156 ntBASIC18.33■□□□□ 0.52
GPC3P51654 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC3P51654 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GPC3P51654 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.33■□□□□ 0.52
GPC3P51654 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GPC3P51654 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC3P51654 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC3P51654 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 SNX33P1-201ENST00000592116 1762 ntBASIC18.32■□□□□ 0.52
GPC3P51654 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC3P51654 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GPC3P51654 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GPC3P51654 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GPC3P51654 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 CNN2P2-201ENST00000443536 909 ntBASIC18.32■□□□□ 0.52
GPC3P51654 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GPC3P51654 CNN2P3-201ENST00000450201 906 ntBASIC18.32■□□□□ 0.52
GPC3P51654 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 AC067863.1-201ENST00000494933 530 ntBASIC18.32■□□□□ 0.52
GPC3P51654 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC3P51654 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 AL136317.3-201ENST00000618497 906 ntBASIC18.32■□□□□ 0.52
GPC3P51654 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
GPC3P51654 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC3P51654 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC3P51654 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC3P51654 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC3P51654 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 AL645728.1-201ENST00000366221 2101 ntBASIC18.31■□□□□ 0.52
GPC3P51654 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.31■□□□□ 0.52
GPC3P51654 KRT18P34-201ENST00000488218 1270 ntBASIC18.31■□□□□ 0.52
GPC3P51654 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 AP002490.2-201ENST00000524791 560 ntBASIC18.31■□□□□ 0.52
GPC3P51654 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.31■□□□□ 0.52
GPC3P51654 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC3P51654 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
GPC3P51654 AC051619.7-201ENST00000568314 623 ntBASIC18.31■□□□□ 0.52
GPC3P51654 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GPC3P51654 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC3P51654 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms