Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 KRT8P49-201ENST00000604166 1432 ntBASIC14.72□□□□□ -0.05
SOX2P48431 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.72□□□□□ -0.05
SOX2P48431 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.72□□□□□ -0.05
SOX2P48431 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 AC016734.2-201ENST00000624325 1377 ntBASIC14.72□□□□□ -0.05
SOX2P48431 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SOX2P48431 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.71□□□□□ -0.05
SOX2P48431 AP002414.1-201ENST00000391405 1147 ntBASIC14.71□□□□□ -0.05
SOX2P48431 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SOX2P48431 SPDYE21P-201ENST00000413323 827 ntBASIC14.71□□□□□ -0.05
SOX2P48431 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.71□□□□□ -0.05
SOX2P48431 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.71□□□□□ -0.05
SOX2P48431 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.71□□□□□ -0.05
SOX2P48431 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.71□□□□□ -0.05
SOX2P48431 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SOX2P48431 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.71□□□□□ -0.05
SOX2P48431 RN7SL850P-201ENST00000579959 291 ntBASIC14.71□□□□□ -0.05
SOX2P48431 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SOX2P48431 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.71□□□□□ -0.05
SOX2P48431 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 BNIP3P18-201ENST00000593976 575 ntBASIC14.71□□□□□ -0.05
SOX2P48431 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.71□□□□□ -0.05
SOX2P48431 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.71□□□□□ -0.05
SOX2P48431 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SOX2P48431 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SOX2P48431 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SOX2P48431 DBET-201ENST00000630918 3363 ntBASIC14.71□□□□□ -0.06
SOX2P48431 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SOX2P48431 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SOX2P48431 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.71□□□□□ -0.06
SOX2P48431 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SOX2P48431 AL596087.1-201ENST00000400979 1969 ntBASIC14.71□□□□□ -0.06
SOX2P48431 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SOX2P48431 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SOX2P48431 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SOX2P48431 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SOX2P48431 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 AC006277.1-201ENST00000624348 1610 ntBASIC14.7□□□□□ -0.06
SOX2P48431 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.7□□□□□ -0.06
SOX2P48431 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
SOX2P48431 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SOX2P48431 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
SOX2P48431 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.7□□□□□ -0.06
SOX2P48431 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.7□□□□□ -0.06
SOX2P48431 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
SOX2P48431 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.7□□□□□ -0.06
SOX2P48431 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SOX2P48431 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 NSUN5P1-202ENST00000421140 1535 ntBASIC14.7□□□□□ -0.06
SOX2P48431 NSUN5P2-203ENST00000457352 1529 ntBASIC14.7□□□□□ -0.06
SOX2P48431 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
SOX2P48431 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.7□□□□□ -0.06
SOX2P48431 AC243591.1-201ENST00000452967 1364 ntBASIC14.7□□□□□ -0.06
SOX2P48431 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SOX2P48431 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms