Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BRCC3P46736 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.63■□□□□ 0.41
BRCC3P46736 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 INGX-202ENST00000489074 768 ntBASIC17.63■□□□□ 0.41
BRCC3P46736 RNA5SP421-201ENST00000516864 134 ntBASIC17.63■□□□□ 0.41
BRCC3P46736 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.63■□□□□ 0.41
BRCC3P46736 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCC3P46736 AL158211.3-201ENST00000607385 239 ntBASIC17.63■□□□□ 0.41
BRCC3P46736 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCC3P46736 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCC3P46736 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRCC3P46736 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.63■□□□□ 0.41
BRCC3P46736 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BRCC3P46736 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCC3P46736 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BRCC3P46736 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 UGT1A2P-201ENST00000454886 866 ntBASIC17.62■□□□□ 0.41
BRCC3P46736 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.62■□□□□ 0.41
BRCC3P46736 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.62■□□□□ 0.41
BRCC3P46736 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCC3P46736 AJ011932.1-201ENST00000621707 465 ntBASIC17.62■□□□□ 0.41
BRCC3P46736 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRCC3P46736 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.62■□□□□ 0.41
BRCC3P46736 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.62■□□□□ 0.41
BRCC3P46736 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.61■□□□□ 0.41
BRCC3P46736 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BRCC3P46736 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BRCC3P46736 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BRCC3P46736 HLA-H-201ENST00000383620 1096 ntBASIC17.61■□□□□ 0.41
BRCC3P46736 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
BRCC3P46736 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.61■□□□□ 0.41
BRCC3P46736 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.61■□□□□ 0.41
BRCC3P46736 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.61■□□□□ 0.41
BRCC3P46736 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.61■□□□□ 0.41
BRCC3P46736 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 PKD1P1-201ENST00000458669 6805 ntBASIC17.61■□□□□ 0.41
BRCC3P46736 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BRCC3P46736 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BRCC3P46736 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BRCC3P46736 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.61■□□□□ 0.41
BRCC3P46736 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.61■□□□□ 0.41
BRCC3P46736 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 GGT4P-201ENST00000623672 1708 ntBASIC17.61■□□□□ 0.41
BRCC3P46736 GPAA1P2-202ENST00000606848 1787 ntBASIC17.61■□□□□ 0.41
BRCC3P46736 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRCC3P46736 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRCC3P46736 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms