Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.77□□□□□ -0.21
SNCAP37840 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 VENTXP7-201ENST00000475503 772 ntBASIC13.77□□□□□ -0.21
SNCAP37840 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.77□□□□□ -0.21
SNCAP37840 AC124947.2-201ENST00000547118 1133 ntBASIC13.77□□□□□ -0.21
SNCAP37840 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 AC006011.2-201ENST00000621313 1158 ntBASIC13.77□□□□□ -0.21
SNCAP37840 AC022532.1-201ENST00000624563 1728 ntBASIC13.77□□□□□ -0.21
SNCAP37840 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 TNRC18P2-201ENST00000417666 2714 ntBASIC13.77□□□□□ -0.21
SNCAP37840 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.77□□□□□ -0.21
SNCAP37840 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.76□□□□□ -0.21
SNCAP37840 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 SLC25A1P3-201ENST00000395415 828 ntBASIC13.76□□□□□ -0.21
SNCAP37840 AL671277.2-201ENST00000458060 996 ntBASIC13.76□□□□□ -0.21
SNCAP37840 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.76□□□□□ -0.21
SNCAP37840 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.76□□□□□ -0.21
SNCAP37840 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.76□□□□□ -0.21
SNCAP37840 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SNCAP37840 LINC01023-201ENST00000606054 436 ntBASIC13.76□□□□□ -0.21
SNCAP37840 AL592071.1-201ENST00000611956 408 ntBASIC13.76□□□□□ -0.21
SNCAP37840 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SNCAP37840 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCAP37840 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCAP37840 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.75□□□□□ -0.21
SNCAP37840 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms