Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RORAP35398 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RORAP35398 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.8■□□□□ 0.12
RORAP35398 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.8■□□□□ 0.12
RORAP35398 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.8■□□□□ 0.12
RORAP35398 FAM86GP-201ENST00000448322 971 ntBASIC15.8■□□□□ 0.12
RORAP35398 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 AC013467.2-201ENST00000605472 835 ntBASIC15.8■□□□□ 0.12
RORAP35398 Z92544.3-201ENST00000624747 417 ntBASIC15.8■□□□□ 0.12
RORAP35398 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RORAP35398 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 AC060834.1-201ENST00000443027 2032 ntBASIC15.79■□□□□ 0.12
RORAP35398 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.79■□□□□ 0.12
RORAP35398 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.79■□□□□ 0.12
RORAP35398 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.79■□□□□ 0.12
RORAP35398 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.79■□□□□ 0.12
RORAP35398 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 AC008267.7-201ENST00000624570 1194 ntBASIC15.79■□□□□ 0.12
RORAP35398 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.79■□□□□ 0.12
RORAP35398 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 MST1L-201ENST00000442552 2185 ntBASIC15.79■□□□□ 0.12
RORAP35398 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RORAP35398 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RORAP35398 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 UXT-AS1-201ENST00000590504 1525 ntBASIC15.78■□□□□ 0.12
RORAP35398 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 AC092068.3-201ENST00000587894 2016 ntBASIC15.78■□□□□ 0.12
RORAP35398 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 AL391005.1-201ENST00000623953 2435 ntBASIC15.78■□□□□ 0.12
RORAP35398 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms