Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 RNU1-129P-201ENST00000384064 167 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 AL645939.2-201ENST00000427340 991 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 AC005237.2-201ENST00000434368 219 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 AC004449.1-201ENST00000564240 433 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1BP28222 MIR3909-201ENST00000579518 119 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 U1.21-201ENST00000580816 167 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.59■□□□□ 0.25
HTR1BP28222 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1BP28222 AL031055.1-201ENST00000606362 631 ntBASIC16.59■□□□□ 0.25
HTR1BP28222 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HTR1BP28222 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
HTR1BP28222 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTR1BP28222 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1BP28222 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1BP28222 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1BP28222 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1BP28222 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
HTR1BP28222 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1BP28222 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1BP28222 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.58■□□□□ 0.24
HTR1BP28222 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 AC092474.2-201ENST00000424288 719 ntBASIC16.58■□□□□ 0.24
HTR1BP28222 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HTR1BP28222 AL135744.1-201ENST00000565098 629 ntBASIC16.58■□□□□ 0.24
HTR1BP28222 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.58■□□□□ 0.24
HTR1BP28222 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HTR1BP28222 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HTR1BP28222 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HTR1BP28222 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1BP28222 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1BP28222 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HTR1BP28222 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HTR1BP28222 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.57■□□□□ 0.24
HTR1BP28222 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HTR1BP28222 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.57■□□□□ 0.24
HTR1BP28222 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR1BP28222 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms