Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX1P22670 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX1P22670 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.12■□□□□ 0.49
RFX1P22670 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX1P22670 CYP2T1P-202ENST00000641596 2535 ntBASIC18.12■□□□□ 0.49
RFX1P22670 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX1P22670 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX1P22670 VN2R19P-201ENST00000442399 1052 ntBASIC18.12■□□□□ 0.49
RFX1P22670 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX1P22670 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX1P22670 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RFX1P22670 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 AL353732.1-201ENST00000569618 1459 ntBASIC18.12■□□□□ 0.49
RFX1P22670 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFX1P22670 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX1P22670 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RFX1P22670 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX1P22670 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX1P22670 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX1P22670 TSEN15P1-201ENST00000423257 515 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC108073.2-201ENST00000464002 357 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC107918.2-201ENST00000530817 355 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC005412.3-201ENST00000580309 715 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC008667.4-201ENST00000607370 168 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC093028.1-201ENST00000622998 982 ntBASIC18.11■□□□□ 0.49
RFX1P22670 AC129492.6-201ENST00000611383 1305 ntBASIC18.11■□□□□ 0.49
RFX1P22670 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX1P22670 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFX1P22670 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 AC131009.4-201ENST00000624048 1740 ntBASIC18.11■□□□□ 0.49
RFX1P22670 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX1P22670 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX1P22670 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX1P22670 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFX1P22670 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.1■□□□□ 0.49
RFX1P22670 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RFX1P22670 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 ME2P1-201ENST00000426028 1970 ntBASIC18.1■□□□□ 0.49
RFX1P22670 SNX33P1-201ENST00000592116 1762 ntBASIC18.1■□□□□ 0.49
RFX1P22670 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.1■□□□□ 0.49
RFX1P22670 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFX1P22670 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RFX1P22670 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
RFX1P22670 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFX1P22670 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RFX1P22670 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.1■□□□□ 0.49
RFX1P22670 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFX1P22670 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX1P22670 AC006449.5-201ENST00000610658 2098 ntBASIC18.1■□□□□ 0.49
RFX1P22670 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.1■□□□□ 0.49
RFX1P22670 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 UBALD1-205ENST00000590891 2641 ntBASIC18.09■□□□□ 0.49
RFX1P22670 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 KRT8P39-201ENST00000396270 1433 ntBASIC18.09■□□□□ 0.49
RFX1P22670 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX1P22670 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX1P22670 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms