Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.25■□□□□ 0.67
ERCC3P19447 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ERCC3P19447 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 AC015922.1-201ENST00000421102 1152 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 TERF1P3-201ENST00000505638 1227 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC3P19447 AL158211.3-201ENST00000607385 239 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 AP001350.2-201ENST00000625104 1094 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 AF228730.6-201ENST00000641497 218 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 AC084121.3-201ENST00000641716 218 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 AC105233.6-201ENST00000642093 218 ntBASIC19.25■□□□□ 0.67
ERCC3P19447 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC3P19447 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC3P19447 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
ERCC3P19447 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.24■□□□□ 0.67
ERCC3P19447 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC3P19447 AC097493.3-201ENST00000509725 367 ntBASIC19.24■□□□□ 0.67
ERCC3P19447 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.24■□□□□ 0.67
ERCC3P19447 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 AL138918.1-201ENST00000568306 659 ntBASIC19.24■□□□□ 0.67
ERCC3P19447 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC3P19447 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ERCC3P19447 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC3P19447 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 AC016396.2-201ENST00000562575 1417 ntBASIC19.24■□□□□ 0.67
ERCC3P19447 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ERCC3P19447 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC3P19447 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ERCC3P19447 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ERCC3P19447 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC3P19447 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC3P19447 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC3P19447 AC069120.2-201ENST00000524091 540 ntBASIC19.23■□□□□ 0.67
ERCC3P19447 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.23■□□□□ 0.67
ERCC3P19447 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC3P19447 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC3P19447 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERCC3P19447 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC3P19447 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC3P19447 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms