Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 GGT4P-201ENST00000623672 1708 ntBASIC17.55■□□□□ 0.4
KRT3P12035 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
KRT3P12035 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT3P12035 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT3P12035 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 AC006449.5-201ENST00000610658 2098 ntBASIC17.54■□□□□ 0.4
KRT3P12035 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT3P12035 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KRT3P12035 IL9RP2-201ENST00000423948 1312 ntBASIC17.54■□□□□ 0.4
KRT3P12035 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KRT3P12035 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 AC005052.1-201ENST00000625181 2492 ntBASIC17.54■□□□□ 0.4
KRT3P12035 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT3P12035 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
KRT3P12035 RPL13AP23-201ENST00000480739 586 ntBASIC17.54■□□□□ 0.4
KRT3P12035 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT3P12035 AC096734.2-201ENST00000562054 433 ntBASIC17.54■□□□□ 0.4
KRT3P12035 AC034105.1-201ENST00000563488 319 ntBASIC17.54■□□□□ 0.4
KRT3P12035 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 AL645728.2-201ENST00000641974 660 ntBASIC17.54■□□□□ 0.4
KRT3P12035 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT3P12035 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT3P12035 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT3P12035 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT3P12035 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT3P12035 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT3P12035 AC092364.2-201ENST00000596710 2692 ntBASIC17.53■□□□□ 0.4
KRT3P12035 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
KRT3P12035 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 AL590627.1-203ENST00000421194 1026 ntBASIC17.53■□□□□ 0.4
KRT3P12035 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT3P12035 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.53■□□□□ 0.4
KRT3P12035 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT3P12035 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KRT3P12035 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT3P12035 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KRT3P12035 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KRT3P12035 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT3P12035 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT3P12035 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT3P12035 HMGA1P7-201ENST00000406908 502 ntBASIC17.52■□□□□ 0.4
KRT3P12035 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
KRT3P12035 AC026396.1-201ENST00000419388 421 ntBASIC17.52■□□□□ 0.4
KRT3P12035 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.52■□□□□ 0.4
KRT3P12035 RHOQP3-201ENST00000437982 621 ntBASIC17.52■□□□□ 0.4
KRT3P12035 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT3P12035 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms