Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 AC092053.1-201ENST00000605787 1936 ntBASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CSB-PGBD3P0DP91 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC055876.2-201ENST00000531834 546 ntBASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC124947.2-201ENST00000547118 1133 ntBASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CSB-PGBD3P0DP91 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AC134043.2-201ENST00000624206 2238 ntBASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AC114501.2-201ENST00000439631 535 ntBASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 TPRX2P-201ENST00000535362 881 ntBASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSB-PGBD3P0DP91 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 SRD5A3P1-201ENST00000603021 949 ntBASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 AL033527.5-202ENST00000641632 1098 ntBASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms