Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.08■□□□□ 0.01
FREM3P0C091 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0.01
FREM3P0C091 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.08■□□□□ 0.01
FREM3P0C091 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
FREM3P0C091 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.08■□□□□ 0.01
FREM3P0C091 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.08■□□□□ 0.01
FREM3P0C091 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.08■□□□□ 0.01
FREM3P0C091 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.08■□□□□ 0.01
FREM3P0C091 AJ011932.1-201ENST00000621707 465 ntBASIC15.08■□□□□ 0.01
FREM3P0C091 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM3P0C091 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.08■□□□□ 0.01
FREM3P0C091 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
FREM3P0C091 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
FREM3P0C091 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.08■□□□□ 0
FREM3P0C091 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
FREM3P0C091 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 AC018695.7-201ENST00000624587 2492 ntBASIC15.08■□□□□ 0
FREM3P0C091 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FREM3P0C091 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 UXT-AS1-201ENST00000590504 1525 ntBASIC15.08■□□□□ 0
FREM3P0C091 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
FREM3P0C091 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.08■□□□□ 0
FREM3P0C091 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.08■□□□□ 0
FREM3P0C091 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.08■□□□□ 0
FREM3P0C091 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
FREM3P0C091 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.08■□□□□ 0
FREM3P0C091 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
FREM3P0C091 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.08■□□□□ 0
FREM3P0C091 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.08■□□□□ 0
FREM3P0C091 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM3P0C091 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 AC002056.1-201ENST00000395613 760 ntBASIC15.07■□□□□ 0
FREM3P0C091 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.07■□□□□ 0
FREM3P0C091 AL161645.1-201ENST00000622716 1255 ntBASIC15.07■□□□□ 0
FREM3P0C091 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
FREM3P0C091 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.07■□□□□ 0
FREM3P0C091 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FREM3P0C091 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
FREM3P0C091 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.07■□□□□ 0
FREM3P0C091 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.07■□□□□ 0
FREM3P0C091 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.07■□□□□ 0
FREM3P0C091 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 AP000842.3-202ENST00000569238 1080 ntBASIC15.07■□□□□ 0
FREM3P0C091 AL355385.1-201ENST00000606123 409 ntBASIC15.07■□□□□ 0
FREM3P0C091 AC093028.1-201ENST00000622998 982 ntBASIC15.07■□□□□ 0
FREM3P0C091 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.07■□□□□ 0
FREM3P0C091 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.07■□□□□ 0
FREM3P0C091 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 LINC00895-201ENST00000629028 1637 ntBASIC15.06■□□□□ 0
FREM3P0C091 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
FREM3P0C091 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 KRT8P39-201ENST00000396270 1433 ntBASIC15.06■□□□□ 0
FREM3P0C091 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FREM3P0C091 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
FREM3P0C091 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms