Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT6AP02538 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 SLC25A6P2-201ENST00000497974 877 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 OR7E14P-202ENST00000530490 1290 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.17■□□□□ 0.18
KRT6AP02538 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 CLEC4GP1-201ENST00000596555 870 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 AP001350.2-201ENST00000625104 1094 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KRT6AP02538 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 SNX33P1-201ENST00000592116 1762 ntBASIC16.17■□□□□ 0.18
KRT6AP02538 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KRT6AP02538 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
KRT6AP02538 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
KRT6AP02538 AL671710.1-201ENST00000610245 2349 ntBASIC16.16■□□□□ 0.18
KRT6AP02538 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT6AP02538 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT6AP02538 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.16■□□□□ 0.18
KRT6AP02538 AC136632.2-201ENST00000512891 861 ntBASIC16.16■□□□□ 0.18
KRT6AP02538 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT6AP02538 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.16■□□□□ 0.18
KRT6AP02538 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
KRT6AP02538 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT6AP02538 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT6AP02538 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT6AP02538 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
KRT6AP02538 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KRT6AP02538 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT6AP02538 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT6AP02538 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms