Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL2A1P02458 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL2A1P02458 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.16■□□□□ 0.66
COL2A1P02458 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.16■□□□□ 0.66
COL2A1P02458 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.16■□□□□ 0.66
COL2A1P02458 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.16■□□□□ 0.66
COL2A1P02458 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.16■□□□□ 0.66
COL2A1P02458 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
COL2A1P02458 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 AL109936.8-201ENST00000641772 604 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 AC005622.1-201ENST00000636801 1703 ntBASIC19.15■□□□□ 0.66
COL2A1P02458 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL2A1P02458 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 AL136982.4-201ENST00000437689 1740 ntBASIC19.15■□□□□ 0.66
COL2A1P02458 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.15■□□□□ 0.66
COL2A1P02458 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL2A1P02458 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.15■□□□□ 0.66
COL2A1P02458 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL2A1P02458 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.15■□□□□ 0.66
COL2A1P02458 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.15■□□□□ 0.66
COL2A1P02458 IGHV3-72-202ENST00000621503 303 ntBASIC19.15■□□□□ 0.66
COL2A1P02458 AC007431.3-201ENST00000623221 587 ntBASIC19.15■□□□□ 0.66
COL2A1P02458 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL2A1P02458 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL2A1P02458 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL2A1P02458 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.14■□□□□ 0.66
COL2A1P02458 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL2A1P02458 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
COL2A1P02458 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL2A1P02458 AC138969.3-201ENST00000546612 1459 ntBASIC19.14■□□□□ 0.66
COL2A1P02458 AC138932.2-201ENST00000548268 1459 ntBASIC19.14■□□□□ 0.66
COL2A1P02458 AC126755.4-201ENST00000549796 1459 ntBASIC19.14■□□□□ 0.66
COL2A1P02458 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.14■□□□□ 0.65
COL2A1P02458 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COL2A1P02458 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.14■□□□□ 0.65
COL2A1P02458 FO393414.2-201ENST00000405153 598 ntBASIC19.14■□□□□ 0.65
COL2A1P02458 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL2A1P02458 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.14■□□□□ 0.65
COL2A1P02458 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.14■□□□□ 0.65
COL2A1P02458 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.14■□□□□ 0.65
COL2A1P02458 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 RRP7BP-205ENST00000566851 833 ntBASIC19.14■□□□□ 0.65
COL2A1P02458 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.14■□□□□ 0.65
COL2A1P02458 AL008721.1-201ENST00000609964 604 ntBASIC19.14■□□□□ 0.65
COL2A1P02458 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
COL2A1P02458 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL2A1P02458 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL2A1P02458 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
COL2A1P02458 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.13■□□□□ 0.65
COL2A1P02458 U91328.1-201ENST00000437528 223 ntBASIC19.13■□□□□ 0.65
COL2A1P02458 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.13■□□□□ 0.65
COL2A1P02458 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.13■□□□□ 0.65
COL2A1P02458 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.13■□□□□ 0.65
COL2A1P02458 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.13■□□□□ 0.65
COL2A1P02458 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.13■□□□□ 0.65
COL2A1P02458 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms