Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 RN7SL190P-201ENST00000582519 257 ntBASIC18.75■□□□□ 0.59
ALDH1A1P00352 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ALDH1A1P00352 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.75■□□□□ 0.59
ALDH1A1P00352 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 AL671710.1-201ENST00000610245 2349 ntBASIC18.74■□□□□ 0.59
ALDH1A1P00352 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 AC005229.1-201ENST00000392885 409 ntBASIC18.74■□□□□ 0.59
ALDH1A1P00352 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 AC036164.1-201ENST00000570544 333 ntBASIC18.74■□□□□ 0.59
ALDH1A1P00352 AC243960.2-201ENST00000600996 747 ntBASIC18.74■□□□□ 0.59
ALDH1A1P00352 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ALDH1A1P00352 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALDH1A1P00352 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 AP000812.2-201ENST00000538934 718 ntBASIC18.73■□□□□ 0.59
ALDH1A1P00352 AC079316.1-201ENST00000548397 411 ntBASIC18.73■□□□□ 0.59
ALDH1A1P00352 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALDH1A1P00352 AC116353.5-201ENST00000638148 1699 ntBASIC18.73■□□□□ 0.59
ALDH1A1P00352 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.73■□□□□ 0.59
ALDH1A1P00352 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 YBX1P6-201ENST00000442962 1002 ntBASIC18.72■□□□□ 0.59
ALDH1A1P00352 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms