Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 HLA-J-203ENST00000494367 1087 ntBASIC16.36■□□□□ 0.21
CPNE6O95741 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE6O95741 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE6O95741 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
CPNE6O95741 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE6O95741 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE6O95741 AC025678.2-201ENST00000562061 970 ntBASIC16.36■□□□□ 0.21
CPNE6O95741 AC005412.3-201ENST00000580309 715 ntBASIC16.36■□□□□ 0.21
CPNE6O95741 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE6O95741 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE6O95741 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE6O95741 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
CPNE6O95741 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 OR6D1P-202ENST00000641007 5290 ntBASIC16.36■□□□□ 0.21
CPNE6O95741 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE6O95741 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE6O95741 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE6O95741 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE6O95741 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE6O95741 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE6O95741 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.35■□□□□ 0.21
CPNE6O95741 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CPNE6O95741 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE6O95741 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CPNE6O95741 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE6O95741 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CPNE6O95741 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE6O95741 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 AC008741.2-201ENST00000612792 3115 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 MIR770-201ENST00000390219 98 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE6O95741 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 SPDYE11-202ENST00000450699 704 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 RN7SL589P-201ENST00000481268 310 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE6O95741 SPDYE9P-201ENST00000570642 692 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.34■□□□□ 0.21
CPNE6O95741 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 LINC02084-201ENST00000606069 1096 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 AC099522.2-201ENST00000607001 744 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 SPDYE10P-202ENST00000612005 668 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 SPDYE8P-202ENST00000612377 668 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 AC060834.1-201ENST00000443027 2032 ntBASIC16.34■□□□□ 0.21
CPNE6O95741 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms