Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC23.81■■□□□ 1.4
POLR1AO95602 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
POLR1AO95602 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC23.81■■□□□ 1.4
POLR1AO95602 MIR1908-201ENST00000410394 80 ntBASIC23.81■■□□□ 1.4
POLR1AO95602 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC23.81■■□□□ 1.4
POLR1AO95602 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.81■■□□□ 1.4
POLR1AO95602 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.81■■□□□ 1.4
POLR1AO95602 AC015936.2-201ENST00000593177 259 ntBASIC23.81■■□□□ 1.4
POLR1AO95602 SRD5A3P1-201ENST00000603021 949 ntBASIC23.81■■□□□ 1.4
POLR1AO95602 TMEM261P1-201ENST00000604899 340 ntBASIC23.81■■□□□ 1.4
POLR1AO95602 AC021097.1-201ENST00000607902 574 ntBASIC23.81■■□□□ 1.4
POLR1AO95602 PFAS-212ENST00000625942 396 ntTSL 5 BASIC23.81■■□□□ 1.4
POLR1AO95602 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
POLR1AO95602 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
POLR1AO95602 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
POLR1AO95602 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 AC105020.1-201ENST00000435356 2205 ntBASIC23.8■■□□□ 1.4
POLR1AO95602 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.8■■□□□ 1.4
POLR1AO95602 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
POLR1AO95602 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC23.8■■□□□ 1.4
POLR1AO95602 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.8■■□□□ 1.4
POLR1AO95602 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
POLR1AO95602 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC23.8■■□□□ 1.4
POLR1AO95602 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
POLR1AO95602 CYP2A7P1-201ENST00000595391 815 ntBASIC23.8■■□□□ 1.4
POLR1AO95602 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC23.8■■□□□ 1.4
POLR1AO95602 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC23.8■■□□□ 1.4
POLR1AO95602 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC23.8■■□□□ 1.4
POLR1AO95602 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR1AO95602 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
POLR1AO95602 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 BOLA2P3-201ENST00000404566 256 ntBASIC23.79■■□□□ 1.4
POLR1AO95602 FTH1-202ENST00000526640 786 ntTSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
POLR1AO95602 AC010319.3-201ENST00000597028 470 ntBASIC23.79■■□□□ 1.4
POLR1AO95602 AC244093.1-201ENST00000610837 814 ntBASIC23.79■■□□□ 1.4
POLR1AO95602 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC23.79■■□□□ 1.4
POLR1AO95602 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
POLR1AO95602 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
POLR1AO95602 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC23.79■■□□□ 1.4
POLR1AO95602 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.79■■□□□ 1.4
POLR1AO95602 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR1AO95602 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC23.79■■□□□ 1.4
POLR1AO95602 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.79■■□□□ 1.4
POLR1AO95602 HLA-A-202ENST00000376806 1854 ntBASIC23.78■■□□□ 1.4
POLR1AO95602 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
POLR1AO95602 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
POLR1AO95602 OS9-205ENST00000413095 1660 ntTSL 2 BASIC23.78■■□□□ 1.4
POLR1AO95602 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
POLR1AO95602 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms