Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
RTN3O95197 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN3O95197 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTN3O95197 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN3O95197 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTN3O95197 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RTN3O95197 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN3O95197 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.54■□□□□ 0.4
RTN3O95197 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RTN3O95197 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 AC079140.1-201ENST00000508039 487 ntBASIC17.54■□□□□ 0.4
RTN3O95197 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.54■□□□□ 0.4
RTN3O95197 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN3O95197 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.54■□□□□ 0.4
RTN3O95197 AC243562.1-201ENST00000560672 389 ntBASIC17.54■□□□□ 0.4
RTN3O95197 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 AC027612.4-201ENST00000605371 583 ntBASIC17.54■□□□□ 0.4
RTN3O95197 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN3O95197 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 PCDHB17P-201ENST00000539533 2393 ntBASIC17.54■□□□□ 0.4
RTN3O95197 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTN3O95197 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTN3O95197 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTN3O95197 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN3O95197 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 METTL21AP1-201ENST00000438852 635 ntBASIC17.53■□□□□ 0.4
RTN3O95197 AL592309.1-201ENST00000443127 649 ntBASIC17.53■□□□□ 0.4
RTN3O95197 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN3O95197 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.53■□□□□ 0.4
RTN3O95197 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTN3O95197 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN3O95197 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN3O95197 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN3O95197 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms