Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
NKX2-2O95096 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NKX2-2O95096 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
NKX2-2O95096 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.33■□□□□ 0.04
NKX2-2O95096 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.33■□□□□ 0.04
NKX2-2O95096 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX2-2O95096 AC092865.6-201ENST00000642101 219 ntBASIC15.33■□□□□ 0.04
NKX2-2O95096 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NKX2-2O95096 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NKX2-2O95096 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-2O95096 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-2O95096 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX2-2O95096 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-2O95096 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-2O95096 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-2O95096 AC092919.2-201ENST00000623631 1645 ntBASIC15.32■□□□□ 0.04
NKX2-2O95096 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NKX2-2O95096 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-2O95096 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX2-2O95096 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-2O95096 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-2O95096 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NKX2-2O95096 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NKX2-2O95096 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX2-2O95096 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-2O95096 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX2-2O95096 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-2O95096 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
NKX2-2O95096 AL078644.1-201ENST00000609881 752 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms