Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 LINC01144-201ENST00000626198 1710 ntBASIC16.41■□□□□ 0.22
EDF1O60869 AC006486.2-201ENST00000624246 2199 ntBASIC16.41■□□□□ 0.22
EDF1O60869 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.41■□□□□ 0.22
EDF1O60869 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
EDF1O60869 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.41■□□□□ 0.22
EDF1O60869 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.41■□□□□ 0.22
EDF1O60869 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EDF1O60869 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EDF1O60869 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.4■□□□□ 0.22
EDF1O60869 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.4■□□□□ 0.22
EDF1O60869 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 LIN28AP1-201ENST00000429574 405 ntBASIC16.4■□□□□ 0.22
EDF1O60869 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.4■□□□□ 0.22
EDF1O60869 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 AC145285.6-201ENST00000604632 637 ntBASIC16.4■□□□□ 0.22
EDF1O60869 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.4■□□□□ 0.22
EDF1O60869 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
EDF1O60869 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EDF1O60869 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.4■□□□□ 0.22
EDF1O60869 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.4■□□□□ 0.22
EDF1O60869 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.4■□□□□ 0.22
EDF1O60869 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EDF1O60869 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
EDF1O60869 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
EDF1O60869 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.39■□□□□ 0.22
EDF1O60869 TOP3BP1-201ENST00000420768 1380 ntBASIC16.39■□□□□ 0.21
EDF1O60869 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
EDF1O60869 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
EDF1O60869 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.39■□□□□ 0.21
EDF1O60869 LINC00982-205ENST00000420957 435 ntBASIC16.39■□□□□ 0.21
EDF1O60869 AL020989.1-201ENST00000422979 469 ntBASIC16.39■□□□□ 0.21
EDF1O60869 ATP5G1P1-201ENST00000448724 379 ntBASIC16.39■□□□□ 0.21
EDF1O60869 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.39■□□□□ 0.21
EDF1O60869 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.39■□□□□ 0.21
EDF1O60869 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.39■□□□□ 0.21
EDF1O60869 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
EDF1O60869 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EDF1O60869 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
EDF1O60869 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.38■□□□□ 0.21
EDF1O60869 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
EDF1O60869 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
EDF1O60869 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EDF1O60869 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms