Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.33■□□□□ 0.68
CTNND1O60716 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTNND1O60716 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 AL080243.2-201ENST00000418783 582 ntBASIC19.33■□□□□ 0.68
CTNND1O60716 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.33■□□□□ 0.68
CTNND1O60716 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.33■□□□□ 0.68
CTNND1O60716 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.33■□□□□ 0.68
CTNND1O60716 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.33■□□□□ 0.68
CTNND1O60716 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 ZNF890P-202ENST00000530367 1156 ntBASIC19.33■□□□□ 0.68
CTNND1O60716 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 AL139011.1-202ENST00000642063 584 ntBASIC19.33■□□□□ 0.68
CTNND1O60716 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 AC092068.3-201ENST00000587894 2016 ntBASIC19.33■□□□□ 0.68
CTNND1O60716 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CTNND1O60716 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.33■□□□□ 0.68
CTNND1O60716 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.33■□□□□ 0.68
CTNND1O60716 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTNND1O60716 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNND1O60716 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTNND1O60716 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTNND1O60716 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CTNND1O60716 AC139713.2-201ENST00000641328 2723 ntBASIC19.32■□□□□ 0.68
CTNND1O60716 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTNND1O60716 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTNND1O60716 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.32■□□□□ 0.68
CTNND1O60716 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.32■□□□□ 0.68
CTNND1O60716 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 TP53TG3HP-202ENST00000569755 579 ntBASIC19.32■□□□□ 0.68
CTNND1O60716 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CTNND1O60716 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.32■□□□□ 0.68
CTNND1O60716 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTNND1O60716 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNND1O60716 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTNND1O60716 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 PCDHB17P-201ENST00000539533 2393 ntBASIC19.32■□□□□ 0.68
CTNND1O60716 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNND1O60716 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CTNND1O60716 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 BTBD7P1-201ENST00000447253 1453 ntBASIC19.31■□□□□ 0.68
CTNND1O60716 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.31■□□□□ 0.68
CTNND1O60716 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 AL353779.1-201ENST00000434793 351 ntBASIC19.31■□□□□ 0.68
CTNND1O60716 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.31■□□□□ 0.68
CTNND1O60716 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CTNND1O60716 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 AC004840.1-201ENST00000636359 365 ntBASIC19.31■□□□□ 0.68
CTNND1O60716 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTNND1O60716 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 CU639417.3-201ENST00000624240 1404 ntBASIC19.31■□□□□ 0.68
CTNND1O60716 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.31■□□□□ 0.68
CTNND1O60716 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.31■□□□□ 0.68
CTNND1O60716 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms