Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
IDH3BO43837 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
IDH3BO43837 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.38■□□□□ 0.05
IDH3BO43837 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.38■□□□□ 0.05
IDH3BO43837 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IDH3BO43837 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
IDH3BO43837 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
IDH3BO43837 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
IDH3BO43837 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 MIR600HG-201ENST00000449175 5984 ntBASIC15.37■□□□□ 0.05
IDH3BO43837 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
IDH3BO43837 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
IDH3BO43837 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.37■□□□□ 0.05
IDH3BO43837 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.37■□□□□ 0.05
IDH3BO43837 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 TPSP2-201ENST00000561760 610 ntBASIC15.37■□□□□ 0.05
IDH3BO43837 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
IDH3BO43837 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.37■□□□□ 0.05
IDH3BO43837 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
IDH3BO43837 AP000867.4-201ENST00000641616 219 ntBASIC15.37■□□□□ 0.05
IDH3BO43837 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
IDH3BO43837 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
IDH3BO43837 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
IDH3BO43837 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.37■□□□□ 0.05
IDH3BO43837 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IDH3BO43837 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
IDH3BO43837 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
IDH3BO43837 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 AL049597.2-201ENST00000565575 961 ntBASIC15.36■□□□□ 0.05
IDH3BO43837 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
IDH3BO43837 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
IDH3BO43837 BNIP3P18-201ENST00000593976 575 ntBASIC15.36■□□□□ 0.05
IDH3BO43837 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.36■□□□□ 0.05
IDH3BO43837 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.36■□□□□ 0.05
IDH3BO43837 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 NSUN5P1-202ENST00000421140 1535 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms