Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 AL139011.1-202ENST00000642063 584 ntBASIC15.85■□□□□ 0.13
CASQ2O14958 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.85■□□□□ 0.13
CASQ2O14958 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CASQ2O14958 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.85■□□□□ 0.13
CASQ2O14958 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.85■□□□□ 0.13
CASQ2O14958 AL135999.2-201ENST00000622438 1686 ntBASIC15.85■□□□□ 0.13
CASQ2O14958 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.85■□□□□ 0.13
CASQ2O14958 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASQ2O14958 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.85■□□□□ 0.13
CASQ2O14958 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CASQ2O14958 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 AC087386.2-201ENST00000623212 4637 ntBASIC15.84■□□□□ 0.13
CASQ2O14958 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CASQ2O14958 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
CASQ2O14958 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.84■□□□□ 0.13
CASQ2O14958 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.84■□□□□ 0.13
CASQ2O14958 CICP13-201ENST00000422015 2789 ntBASIC15.84■□□□□ 0.13
CASQ2O14958 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.84■□□□□ 0.13
CASQ2O14958 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
CASQ2O14958 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASQ2O14958 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.84■□□□□ 0.13
CASQ2O14958 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASQ2O14958 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASQ2O14958 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASQ2O14958 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.83■□□□□ 0.13
CASQ2O14958 LINC02447-202ENST00000501888 2146 ntBASIC15.83■□□□□ 0.13
CASQ2O14958 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASQ2O14958 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.83■□□□□ 0.13
CASQ2O14958 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.83■□□□□ 0.13
CASQ2O14958 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASQ2O14958 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CASQ2O14958 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.83■□□□□ 0.12
CASQ2O14958 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 MTCL1P1-201ENST00000446207 792 ntBASIC15.83■□□□□ 0.12
CASQ2O14958 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.83■□□□□ 0.12
CASQ2O14958 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 MIR5787-201ENST00000611784 55 ntBASIC15.83■□□□□ 0.12
CASQ2O14958 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.83■□□□□ 0.12
CASQ2O14958 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.83■□□□□ 0.12
CASQ2O14958 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
CASQ2O14958 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASQ2O14958 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms