Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DUX4L27-201ENST00000554796 1261 ntBASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RARRES2P9-201ENST00000565168 469 ntBASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 HLA-J-202ENST00000469281 1241 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RNA5SP421-201ENST00000516864 134 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SPCS2P1-201ENST00000561636 679 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC005498.2-205ENST00000593218 784 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC092364.2-202ENST00000597012 1073 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SPTSSB-204ENST00000617024 1292 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC005332.8-201ENST00000622750 2735 ntBASIC16.61■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 BASP1P1-201ENST00000430708 665 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC093214.1-201ENST00000511688 1107 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 IGHV3-42-201ENST00000520410 361 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC069120.2-201ENST00000524091 540 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AC018529.1-201ENST00000613063 361 ntBASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 AL512652.2-201ENST00000625156 1716 ntBASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C1QTNF3-AMACRE9PGA6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms