Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 AC104109.2-201ENST00000602919 1418 ntBASIC14.7□□□□□ -0.06
NPIPB4C9JG80 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 MIR648-201ENST00000385046 94 ntBASIC14.7□□□□□ -0.06
NPIPB4C9JG80 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 AC064836.3-201ENST00000607928 673 ntBASIC14.7□□□□□ -0.06
NPIPB4C9JG80 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB4C9JG80 AL662844.4-201ENST00000606367 2838 ntBASIC14.7□□□□□ -0.06
NPIPB4C9JG80 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 FDX1P1-201ENST00000449115 551 ntBASIC14.69□□□□□ -0.06
NPIPB4C9JG80 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
NPIPB4C9JG80 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB4C9JG80 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 AC092919.2-201ENST00000623631 1645 ntBASIC14.68□□□□□ -0.06
NPIPB4C9JG80 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB4C9JG80 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms