Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SMIM9A6NGZ8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SMIM9A6NGZ8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 YBX2P1-201ENST00000394192 760 ntBASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 AL009183.1-201ENST00000603760 355 ntBASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 AL513190.1-201ENST00000621254 727 ntBASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SMIM9A6NGZ8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 AC092474.2-201ENST00000424288 719 ntBASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 AC005829.1-201ENST00000570002 483 ntBASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms