Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 MPDU1-223ENST00000582151 728 ntBASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AC005336.2-201ENST00000593183 939 ntBASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 AC243591.1-201ENST00000452967 1364 ntBASIC11.74□□□□□ -0.53
LINC01546A6NGU7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01546A6NGU7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 MROH4P-201ENST00000431302 1578 ntBASIC11.73□□□□□ -0.53
LINC01546A6NGU7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 LINC01238-205ENST00000567549 1107 ntBASIC11.73□□□□□ -0.53
LINC01546A6NGU7 AC141257.4-201ENST00000634557 245 ntBASIC11.73□□□□□ -0.53
LINC01546A6NGU7 AC136944.6-201ENST00000634818 245 ntBASIC11.73□□□□□ -0.53
LINC01546A6NGU7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01546A6NGU7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 AC112693.3-201ENST00000624819 1983 ntBASIC11.72□□□□□ -0.53
LINC01546A6NGU7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LINC01546A6NGU7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms