Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 LINC01144-201ENST00000626198 1710 ntBASIC17.7■□□□□ 0.42
RCCD1A6NED2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 AL445228.2-201ENST00000605589 952 ntBASIC17.7■□□□□ 0.42
RCCD1A6NED2 AC069148.1-201ENST00000608741 768 ntBASIC17.7■□□□□ 0.42
RCCD1A6NED2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 AL139288.1-201ENST00000623748 933 ntBASIC17.7■□□□□ 0.42
RCCD1A6NED2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RCCD1A6NED2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCCD1A6NED2 AC069224.1-201ENST00000566372 1715 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 POU5F1P6-201ENST00000466990 990 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 KRT18P35-201ENST00000510488 1269 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AC091167.2-201ENST00000579581 588 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 MTDHP3-201ENST00000594186 672 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AC006504.4-201ENST00000592118 1568 ntBASIC17.69■□□□□ 0.42
RCCD1A6NED2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCCD1A6NED2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.69■□□□□ 0.42
RCCD1A6NED2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCCD1A6NED2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.68■□□□□ 0.42
RCCD1A6NED2 FOSL1P1-201ENST00000511041 816 ntBASIC17.68■□□□□ 0.42
RCCD1A6NED2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms