Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC006449.5-201ENST00000610658 2098 ntBASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC002310.6-201ENST00000624451 1377 ntBASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ACTG1P4-201ENST00000425123 1122 ntBASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC018845.2-201ENST00000568326 409 ntBASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC055717.3-201ENST00000622967 595 ntBASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FLJ16779-201ENST00000612722 7638 ntBASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.43□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CYP2T1P-202ENST00000641596 2535 ntBASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HCG4B-203ENST00000450128 991 ntBASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TCRBV4S1A1TA0A5B7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TCRBV4S1A1TA0A5B7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms