Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC017083.2-201ENST00000608069 979 ntBASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC004840.1-201ENST00000636359 365 ntBASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA1Q9Y5H4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC093004.1-201ENST00000508850 424 ntBASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC135586.1-201ENST00000539323 574 ntBASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC104794.3-201ENST00000566840 1248 ntBASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC105021.1-202ENST00000570572 669 ntBASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 MIR6799-201ENST00000620297 69 ntBASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA1Q9Y5H4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 AL139384.1-201ENST00000612143 3047 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 AL512384.1-201ENST00000406683 331 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 RN7SL752P-201ENST00000463779 287 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 AC022494.1-201ENST00000466044 728 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 HILS1-202ENST00000545329 423 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 AC093525.9-201ENST00000624961 1746 ntBASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms