Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 PCDHA14-201ENST00000506751 2298 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 HCG4-201ENST00000418983 998 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC004449.1-201ENST00000564240 433 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC093512.1-201ENST00000617969 520 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AP001350.2-201ENST00000625104 1094 ntBASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CROCCP1-201ENST00000426910 5675 ntBASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 BCRP1-201ENST00000444246 691 ntBASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 AL118508.1-201ENST00000613502 2345 ntBASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB1Q9Y5F3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PCDHB1Q9Y5F3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AC087641.1-201ENST00000557561 1021 ntBASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AC023141.13-201ENST00000604991 943 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms