Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 AC008494.3-201ENST00000606615 944 ntBASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 U82695.1-201ENST00000635752 1889 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AP006294.1-201ENST00000415407 339 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 SDHAP3-202ENST00000515467 728 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AC023310.3-201ENST00000557027 670 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AC100756.1-201ENST00000562736 682 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AC138749.3-201ENST00000567691 622 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 AC116165.1-201ENST00000611806 668 ntBASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHANK2Q9UPX8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 MIR6805-201ENST00000615055 62 ntBASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
SHANK2Q9UPX8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 AC092658.1-201ENST00000505836 891 ntBASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 RRP7BP-205ENST00000566851 833 ntBASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 CHCHD2P3-201ENST00000603038 451 ntBASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHANK2Q9UPX8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 AC087499.6-201ENST00000411576 835 ntBASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 AL162274.1-201ENST00000617191 1098 ntBASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 MIR6069-201ENST00000620069 79 ntBASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 AP001094.4-201ENST00000579008 2176 ntBASIC24.33■■□□□ 1.49
SHANK2Q9UPX8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms