Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 AC004461.1-201ENST00000412461 403 ntBASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 AL513210.1-201ENST00000629608 234 ntBASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 KRT8P49-201ENST00000604166 1432 ntBASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 HCG4-201ENST00000418983 998 ntBASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 METTL21AP1-201ENST00000438852 635 ntBASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 AP000344.2-201ENST00000512987 629 ntBASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 MPDU1-223ENST00000582151 728 ntBASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 AC027612.4-201ENST00000605371 583 ntBASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIP2Q9UDT6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AC060834.1-201ENST00000443027 2032 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AL355306.1-201ENST00000415580 579 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 ADH5P3-201ENST00000433842 1137 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AC091167.2-201ENST00000579581 588 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AC022145.2-201ENST00000598203 171 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms