Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC004449.1-201ENST00000564240 433 ntBASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 AC027307.2-201ENST00000591252 911 ntBASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 MIR346-201ENST00000362234 95 ntBASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 HMGN1P19-201ENST00000436976 333 ntBASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AC008267.7-201ENST00000624570 1194 ntBASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.22■□□□□ 0.83
HMG20BQ9P0W2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 IGHV3-62-201ENST00000520057 340 ntBASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 AP000842.3-202ENST00000569238 1080 ntBASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 AC106028.4-201ENST00000614509 607 ntBASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 UXT-AS1-201ENST00000590504 1525 ntBASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HMG20BQ9P0W2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
HMG20BQ9P0W2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20BQ9P0W2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms