Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 TSPY7P-201ENST00000431358 1114 ntBASIC16.2■□□□□ 0.18
NDE1Q9NXR1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.2■□□□□ 0.18
NDE1Q9NXR1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 MIR600HG-201ENST00000449175 5984 ntBASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PRORSD1P-201ENST00000295112 541 ntBASIC16.19■□□□□ 0.18
NDE1Q9NXR1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 AC013467.2-201ENST00000605472 835 ntBASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDE1Q9NXR1 AC125634.1-201ENST00000438758 1403 ntBASIC16.19■□□□□ 0.18
NDE1Q9NXR1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 GGT4P-201ENST00000623672 1708 ntBASIC16.18■□□□□ 0.18
NDE1Q9NXR1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDE1Q9NXR1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms