Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 FER1L4-210ENST00000615531 5998 ntBASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.93■□□□□ 0.14
CCM2LQ9NUG4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 AC092865.5-201ENST00000545435 363 ntBASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 DUX4L17-201ENST00000557360 1267 ntBASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 AC010491.1-201ENST00000563101 2797 ntBASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCM2LQ9NUG4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 AC022532.1-201ENST00000624563 1728 ntBASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 AC090616.6-201ENST00000582640 721 ntBASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 AC064862.7-201ENST00000604520 867 ntBASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 IL9RP2-201ENST00000423948 1312 ntBASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 AL353593.2-201ENST00000602529 1483 ntBASIC15.91■□□□□ 0.14
CCM2LQ9NUG4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCM2LQ9NUG4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms