Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DFFBP1-201ENST00000433250 979 ntBASIC17.56■□□□□ 0.4
TLR9Q9NR96 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 AL079307.3-201ENST00000556114 283 ntBASIC17.56■□□□□ 0.4
TLR9Q9NR96 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.55■□□□□ 0.4
TLR9Q9NR96 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 GIMAP3P-201ENST00000495150 836 ntBASIC17.55■□□□□ 0.4
TLR9Q9NR96 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 AC104794.3-201ENST00000566840 1248 ntBASIC17.55■□□□□ 0.4
TLR9Q9NR96 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 AL133215.2-201ENST00000609242 977 ntBASIC17.55■□□□□ 0.4
TLR9Q9NR96 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
TLR9Q9NR96 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TLR9Q9NR96 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 AL391825.1-201ENST00000457671 1364 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 AL138688.1-201ENST00000624851 1594 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 AC087499.6-201ENST00000411576 835 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 AP006294.1-201ENST00000415407 339 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 GNAQP1-201ENST00000444815 1067 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 ZNF890P-202ENST00000530367 1156 ntBASIC17.54■□□□□ 0.4
TLR9Q9NR96 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TLR9Q9NR96 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TLR9Q9NR96 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms