Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC023824.1-201ENST00000562945 2975 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 AC006504.4-201ENST00000592118 1568 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MTDHP3-201ENST00000594186 672 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 AC138894.3-201ENST00000603787 634 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 AL355877.3-201ENST00000622820 899 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 AL805961.1-202ENST00000641562 540 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 PPT1-215ENST00000641471 2368 ntBASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC52A3Q9NQ40 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 MIR648-201ENST00000385046 94 ntBASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 FGFR3P6-201ENST00000457012 610 ntBASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 MTDHP4-201ENST00000600287 670 ntBASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 AC069148.1-201ENST00000608741 768 ntBASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 AL732292.2-201ENST00000609649 430 ntBASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC52A3Q9NQ40 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms