Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AL139400.1-201ENST00000366220 510 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AL645939.2-201ENST00000427340 991 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 SPCS2P4-201ENST00000436160 681 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 RNF216P1-203ENST00000404404 2427 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AC078925.2-201ENST00000624013 1973 ntBASIC15.47■□□□□ 0.07
MMP25Q9NPA2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MMP25Q9NPA2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 AC069335.1-201ENST00000489972 472 ntBASIC15.46■□□□□ 0.07
MMP25Q9NPA2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 LINC01225-203ENST00000563550 1244 ntBASIC15.46■□□□□ 0.07
MMP25Q9NPA2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 AC016027.1-202ENST00000607927 1699 ntBASIC15.46■□□□□ 0.07
MMP25Q9NPA2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP25Q9NPA2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP25Q9NPA2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP25Q9NPA2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.46■□□□□ 0.06
MMP25Q9NPA2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MMP25Q9NPA2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MMP25Q9NPA2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 PCDHB17P-201ENST00000539533 2393 ntBASIC15.45■□□□□ 0.06
MMP25Q9NPA2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 KRT18P32-201ENST00000424695 1287 ntBASIC15.45■□□□□ 0.06
MMP25Q9NPA2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.45■□□□□ 0.06
MMP25Q9NPA2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms