Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KIAA1549Q9HCM3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC069120.2-201ENST00000524091 540 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 KRT8P23-201ENST00000560090 1207 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC021097.1-201ENST00000607902 574 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 FO538757.1-201ENST00000623083 1397 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC005052.1-201ENST00000625181 2492 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC055876.3-201ENST00000431496 288 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC125807.1-201ENST00000483097 614 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 MIR3197-201ENST00000582241 73 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC092364.2-202ENST00000597012 1073 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 AC138649.4-201ENST00000612222 287 ntBASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.73□□□□□ -0.05
KIAA1549Q9HCM3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 AC097493.3-201ENST00000509725 367 ntBASIC14.72□□□□□ -0.05
KIAA1549Q9HCM3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms