Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 CHCHD2P8-201ENST00000429873 447 ntBASIC18.64■□□□□ 0.57
CBX8Q9HC52 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 AC022616.7-201ENST00000525383 220 ntBASIC18.64■□□□□ 0.57
CBX8Q9HC52 AL136038.3-201ENST00000561909 1096 ntBASIC18.64■□□□□ 0.57
CBX8Q9HC52 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 AL353135.1-201ENST00000606729 504 ntBASIC18.64■□□□□ 0.57
CBX8Q9HC52 AC073592.4-201ENST00000623827 446 ntBASIC18.64■□□□□ 0.57
CBX8Q9HC52 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.64■□□□□ 0.57
CBX8Q9HC52 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX8Q9HC52 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX8Q9HC52 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PPT1-215ENST00000641471 2368 ntBASIC18.62■□□□□ 0.57
CBX8Q9HC52 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.62■□□□□ 0.57
CBX8Q9HC52 AC016734.2-201ENST00000624325 1377 ntBASIC18.62■□□□□ 0.57
CBX8Q9HC52 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX8Q9HC52 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CBX8Q9HC52 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 TNRC18P2-201ENST00000417666 2714 ntBASIC18.61■□□□□ 0.57
CBX8Q9HC52 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 PCGF3-213ENST00000620529 1899 ntBASIC18.61■□□□□ 0.57
CBX8Q9HC52 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX8Q9HC52 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
CBX8Q9HC52 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms